Coronavirus, which the World Health Organization has now officially labeled a pandemic, is taking a toll on communities around the world. Theres currently no cure for COVID-19, but scientists are working on drugs that could help slow its spread. Fortunately, citizens can get involved in the process.
Foldit is an online video game that challenges players to fold various proteins into shapes where they are stable. Generally, folding proteins allows scientists (and citizens) to design new proteins from scratch, but in the case of coronavirus, Foldit players are trying to design the drugs to combat it. Coronavirus has a spike protein that it uses to recognize human cells, says Brian Koepnick, a biochemist and researcher with the University of Washingtons Institute for Protein Design who has been using Foldit for protein research for six years. Foldit players are designing new protein drugs that can bind to the COVID spike and block this recognition, [which could] potentially stop the virus from infecting more cells in an individual who has already been exposed to the virus.
First released in 2008, Foldit grew out of an experimental research project developed by the University of Washingtons Center for Game Science along with the Department of Biochemistry. Foldits coronavirus puzzle is the games 1,808th ever. Playerswho can work alone or in teamsare using the games puzzle system to develop new protein structures that can be tested by biochemists in the lab for use in antiviral drugs.
In Foldit, you change the shape of a protein model to optimize your score. This score is actually a sophisticated calculation of the folds potential energy, says Koepnick, adding that professional researchers use an identical score function in their work. The coronavirus puzzles are set up such that high-scoring models have a better chance of actually binding to the target spike protein. Ultimately, high-scoring solutions are analyzed by researchers and considered for real-world use.
Since its inception, over half a million people have created accounts and played Foldit, and over 2,500 players have worked on the games coronavirus puzzles so far.
[Image: courtesy Fold.it]Seth Cooper, the games lead designer and an assistant professor at Northeasterns Khoury College of Computer Sciences, says Foldit was created because the design team figured that people could come up with better solutions than the computer could, and that itd be helpful for people to interact with the 3-D compositions of protein structures to truly understand how they function.
Though these online puzzles werent designed to necessarily address a steadily growing virus such as COVID-19, its become an efficient way to conduct research on the disease safely, at home. I think its really exciting to be able to potentially help out with something like this. . . . Its the kind of thing I think we would have hoped to be able to do [when we started out], Cooper says.
In the past, Foldit players have puzzled together successful synthetic and natural protein structuressuch as ones that helped solve the Mason-Pfizer monkey virus in 2011. Some of the players who are very good at Foldit dont have backgrounds in biochemistry, but the beauty of the games design is that it makes science accessible to laypeople, and it ultimately ends up teaching nonprofessionals a lot. (A handful of Foldit players were credited as authors in a paper Cooper and his colleagues published recently.)
According to Cooper, this solution-based crowdsourcing project is a way to put video games toward a good purpose. When people are playing games, theyre solving problems anyway, so its nice to apply that brainpower to solving problems in the real world.
Go here to read the rest:
This online puzzle game may find a coronavirus treatment - Fast Company
- CU Boulder Biochemistry Professor Xuedong Liu Recognized as an elite member of the 2024 Class of Fellows by the National Academy of Investors (NAI) -... - December 23rd, 2024 [December 23rd, 2024]
- ACBICON 2024 Shines Bright: Celebrating 50 Years of Excellence in Clinical Biochemistry - :: India News Calling :: - December 9th, 2024 [December 9th, 2024]
- Teen achiever eyes global impact in medicine and biochemistry - Jamaica Gleaner - December 9th, 2024 [December 9th, 2024]
- Biochemistry senior connects with community through service organizations - University of South Carolina - November 28th, 2024 [November 28th, 2024]
- 2025 Summer Intern - Peptide Therapeutics, Early Discovery Biochemistry - Genentech - November 28th, 2024 [November 28th, 2024]
- Postdoctoral Position in Structural Biology/Biochemistry - Helsinki, Finland job with UNIVERSITY OF HELSINKI | 384233 - Times Higher Education - November 28th, 2024 [November 28th, 2024]
- Neugebauer named Rose Professor of Molecular Biophysics and Biochemistry - Yale News - November 28th, 2024 [November 28th, 2024]
- Scholarship has Timmins biochemistry student hopeful for the future - TimminsToday - November 20th, 2024 [November 20th, 2024]
- Lu Bai named Verne M. Willaman Professor of Biochemistry and Molecular Biology - Penn State University - November 12th, 2024 [November 12th, 2024]
- Biochemistry and biotechnology major Jay King nearing graduation with plans to pursue PhD in oncologic research - UMSL Daily - November 12th, 2024 [November 12th, 2024]
- A Biochemistry Teaching Experiment That Demonstrates the Digestion of Carbohydrates, Proteins, and Lipids in the Digestive Tract - ACS Publications - November 12th, 2024 [November 12th, 2024]
- SBU Biochemistry alumnus to discuss how plants defend themselves against bacterial pathogens - St. Bonaventure - October 13th, 2024 [October 13th, 2024]
- Exploring the Frontiers of Metabolic Research in Cancer: An Interview with Dr. Alice Chang, B. Pharm., Ph.D. at China Medical University, Institute of... - October 2nd, 2024 [October 2nd, 2024]
- The Hidden Biochemistry of Cold Temperatures: Chilling RNA Discovery Reshapes the Rules of Life - SciTechDaily - September 23rd, 2024 [September 23rd, 2024]
- New sweatband keeps tabs on body biochemistry - The Naked Scientists - September 15th, 2024 [September 15th, 2024]
- Celebrating 25 years of innovation at the department of biochemistry & medical genetics - UM Today - September 15th, 2024 [September 15th, 2024]
- Vinesh Phogat versus the perplexing biochemistry of losing weight - The Hindu - September 2nd, 2024 [September 2nd, 2024]
- Girirajan named head of the Department of Biochemistry and Molecular Biology - Penn State University - July 26th, 2024 [July 26th, 2024]
- Scientists uncover a multibillion-year epic written into the chemistry of life - EurekAlert - June 1st, 2024 [June 1st, 2024]
- Electrolyte and Biochemistry Analyzers Market Is Likely to Experience a Tremendous Growth by 2031 - openPR - June 1st, 2024 [June 1st, 2024]
- Scientists uncover missing link in the Chemistry of Life - Tech Explorist - June 1st, 2024 [June 1st, 2024]
- From negative results to new discoveries in chloroplast biochemistry - Phys.org - April 15th, 2024 [April 15th, 2024]
- Protecting art and passwords with biochemistry - Tech Xplore - April 15th, 2024 [April 15th, 2024]
- 'Always more to discover:' Clarke biochemistry professor shares love of the Bard through Dubuque Shakespeare Project - telegraphherald.com - April 15th, 2024 [April 15th, 2024]
- American Society of Biochemistry and Molecular Biology honors MD/PhD student Hannah Kondolf - The Daily | Case Western Reserve University - April 7th, 2024 [April 7th, 2024]
- Biochemistry and transcriptomic analyses of Phthorimaea absoluta (Lepidoptera: Gelechiidae) response to insecticides ... - Nature.com - April 7th, 2024 [April 7th, 2024]
- Differential responses of Hollyhock (Alcea rosea L.) varieties to salt stress in relation to physiological and biochemical ... - Nature.com - April 7th, 2024 [April 7th, 2024]
- Life's Origins: How Fissures in Hot Rocks May Have Kickstarted Biochemistry - Singularity Hub - April 7th, 2024 [April 7th, 2024]
- Professor Robert Cross awarded Biochemical Society Award for Sustained Excellence - University of Warwick - April 7th, 2024 [April 7th, 2024]
- Study suggests that estrogen may drive nicotine addiction in women - EurekAlert - March 29th, 2024 [March 29th, 2024]
- Yale men's basketball confused for university's Molecular Biophysics and Biochemistry on Twitter - Sporting News - March 29th, 2024 [March 29th, 2024]
- Plants have an astonishing biochemical communication network - Earth.com - March 29th, 2024 [March 29th, 2024]
- Study links long-term consumption of deep-fried oil with increased neurodegeneration - ASBMB Today - March 29th, 2024 [March 29th, 2024]
- New surfactant could improve lung treatments for premature babies - ASBMB Today - March 29th, 2024 [March 29th, 2024]
- The Power and Promise of RNA - Duke University School of Medicine - March 29th, 2024 [March 29th, 2024]
- Commonwealth University biochemistry and pre-medicine concentrations accredited - Lock Haven Express - February 13th, 2024 [February 13th, 2024]
- Afternoon of Science Series: Department of Biochemistry & Molecular Biophysics - Columbia University Irving Medical Center - February 13th, 2024 [February 13th, 2024]
- What Casual Sex, Pigeon Relationships, Bioluminescence and a Drug for Broken Hearts can Tell us About the ... - Nautilus - February 13th, 2024 [February 13th, 2024]
- $2.4 Million in Funding Awarded to Chemistry and Biochemistry Faculty | CSUF News - CSUF News - February 13th, 2024 [February 13th, 2024]
- Associate Professor in Biochemistry and Director of NIH-Funded COBRE job with UNIVERSITY OF NEW HAMPSHIRE ... - Nature.com - February 13th, 2024 [February 13th, 2024]
- USM Chemistry (Biochemistry Emphasis) Degree Earns ASBMB Reaccreditation - The University of Southern Mississippi - February 4th, 2024 [February 4th, 2024]
- AI generates proteins with exceptional binding strength - ASBMB Today - February 4th, 2024 [February 4th, 2024]
- A safe place where biochemistry is valued - ASBMB Today - October 27th, 2023 [October 27th, 2023]
- Chair (W3) of Biochemistry job with TECHNISCHE UNIVERSITAT ... - Times Higher Education - October 27th, 2023 [October 27th, 2023]
- The Biochemistry of Muscle Contraction - Discovery Institute - October 27th, 2023 [October 27th, 2023]
- Department of Biochemistry and Molecular Biology chair and ... - University of Iowa Health Care - October 27th, 2023 [October 27th, 2023]
- Two decorated Brandeis faculty awarded National Medal of Science ... - Brandeis University - October 27th, 2023 [October 27th, 2023]
- Research Assistant / Associate (Department of Biochemistry) job ... - Times Higher Education - October 27th, 2023 [October 27th, 2023]
- ASBMB weighs in on policy changes for dual-use research - ASBMB Today - October 27th, 2023 [October 27th, 2023]
- In the Locker Room with Katie Austin, Mia Brito, and Alaina Di Dio ... - The Oberlin Review - October 27th, 2023 [October 27th, 2023]
- Dr. Tara Schwetz named NIH Deputy Director for Program ... - National Institutes of Health (.gov) - October 27th, 2023 [October 27th, 2023]
- Armstrong Welcomes Burning Swamp The George-Anne Media ... - The George-Anne - October 27th, 2023 [October 27th, 2023]
- Summer Research Projects Grow Depth of Knowledge - Taylor University - October 27th, 2023 [October 27th, 2023]
- Brookings Register | Speakout: Decarbonize industry with nuclear ... - Brookings Register - October 27th, 2023 [October 27th, 2023]
- Professor Yong Sik Ok becomes the first Korean President of the ... - EurekAlert - October 27th, 2023 [October 27th, 2023]
- Partnership between UCR and City of Hope aims to increase ... - UC Riverside - October 27th, 2023 [October 27th, 2023]
- The seeds have been planted: The beautification of Ernst Nature ... - Miami Student - October 27th, 2023 [October 27th, 2023]
- Biochemist selected as Innovation Fund investigator by Pew ... - Pennsylvania State University - October 27th, 2023 [October 27th, 2023]
- UTHealth Houston researchers awarded $3.4M NIH grant to study ... - EurekAlert - October 27th, 2023 [October 27th, 2023]
- Centre professor, students working toward rapid, affordable ... - Danville Advocate - October 27th, 2023 [October 27th, 2023]
- SUNY Potsdam faculty want to keep 13 of 14 programs eyed for cuts ... - The Adirondack Daily Enterprise - October 27th, 2023 [October 27th, 2023]
- Fall Awards recognize long years of service to UWM - University of WisconsinMilwaukee - October 27th, 2023 [October 27th, 2023]
- Shobade selected for inaugural innovation in agriculture award - College of Agriculture and Life Sciences - April 8th, 2023 [April 8th, 2023]
- Three juniors selected as Goldwater Scholars - The Source ... - Washington University in St. Louis - April 8th, 2023 [April 8th, 2023]
- Senior Awarded Fulbright to Germany Susquehanna University - Susquehanna University - April 8th, 2023 [April 8th, 2023]
- CI MED Students Win Top Honors At Startup Showcase at ... - Carle Illinois College of Medicine - April 8th, 2023 [April 8th, 2023]
- Gregory Bowman: Penn Integrates Knowledge University Professor ... - University of Pennsylvania - April 8th, 2023 [April 8th, 2023]
- The Columns W&L's Jaden Keuhner '24 Featured in WSLS 10 ... - The Columns - April 8th, 2023 [April 8th, 2023]
- New anticancer agent activated by ultrasound waves does not have strong side effects - News-Medical.Net - April 8th, 2023 [April 8th, 2023]
- Obituary for Alison Lynn Smoot-Pierce, Conway, SC - Arkansas Online - April 8th, 2023 [April 8th, 2023]
- Finding a way to combat long COVID - EurekAlert - April 8th, 2023 [April 8th, 2023]
- High schoolers awarded for action research | Sioux Center News - nwestiowa.com - April 8th, 2023 [April 8th, 2023]
- Emory researchers discover key pathway for COVID-19 organ ... - Emory News Center - April 8th, 2023 [April 8th, 2023]
- Auburn chemistry graduate student shines as only Southeastern ... - Office of Communications and Marketing - April 8th, 2023 [April 8th, 2023]
- Study uncovers aspect of how muscular dystrophies progress - ASBMB Today - April 8th, 2023 [April 8th, 2023]
- Broccoli intake protects the small intestine lining, inhibits development of disease - News-Medical.Net - April 8th, 2023 [April 8th, 2023]
- The Greek who gave $600 million to education - Kathimerini English Edition - April 8th, 2023 [April 8th, 2023]
- Man linked to firebombing of Wisconsin anti-abortion group via leftover burrito - Yahoo News - April 8th, 2023 [April 8th, 2023]
- Important enzyme for the composition of the gut microbiome discovered - Phys.org - April 8th, 2023 [April 8th, 2023]
- Unraveling the protein map of cell's powerhouse - ASBMB Today - April 8th, 2023 [April 8th, 2023]